PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc016143.1_g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 74aa    MW: 8512.52 Da    PI: 7.6117
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc016143.1_g00001.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.19.6e-12127102128
                      NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                              +kk Lvfy+g+ap+g+ktdW+mhey+l
  Itr_sc016143.1_g00001.1   1 MKKPLVFYTGKAPNGSKTDWIMHEYSL 27 
                              8************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023652.0E-4127IPR003441NAC domain
SuperFamilySSF1019415.49E-16145IPR003441NAC domain
PROSITE profilePS5100521.145145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    Send to blast
MKKPLVFYTG KAPNGSKTDW IMHEYSLADA PQPEENWVLC RIFPKKSGGR NDERSHSSSR  60
DAFHDFFAPE RADL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-11147114170Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086848.12e-20PREDICTED: NAC transcription factor 25
SwissprotQ9FY934e-17NAC83_ARATH; NAC domain-containing protein 83
SwissprotQ9SL415e-17NAC37_ARATH; NAC domain-containing protein 37
TrEMBLA0A0D2V5R52e-19A0A0D2V5R5_G
TrEMBLI1KZG16e-20I1KZG1_SOYBN; Uncharacterized protein
TrEMBLW6JBA62e-19W6JBA6_G
STRINGGLYMA18G53954.11e-18(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16972469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-18NAC domain containing protein 83